miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|33502976|gb|BX613089.1|BX613089 CACCAACACCAACACCAACACCAGTATGACCGGTCGCGGCAAGGGAGGCAAGGGACTGGGAAAGGGAGGAGCCAAGCGTC
ATCGCAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTGGCTCGCCGTGGCGGCGTGAAG
CGTATCTCCGGCCTGATCTACGAAGAGACGCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCAC
CTACACCGAGCACGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGCCGTACGCTCT
ACGGATTCGGAGGTTAAGAAGTTTGCTGTGTGCTATTGCGCGTCCGCGTGTGTGTGTGTGTGCATGTGCCCAGTCGCGGG
ACCGTGTGCGCCGCACGCGCCGTCGCCATCACCCCTCGCTCATCTCGAAACCACCACGGATCATCGGCATACAAGAAAAA
CGGCCCTTTTCAGGGCCACTGATTGAATTGCAGTAAAAAGAACTTCTCTATCGTTCATTCCAATTGGTTCAAAAGGGGGG
TTGTGTGTTCATATTCATTGTTTTATTACAGCCACATCGCCGGTGAAGGTGATGCTAATATTCGCAAGCCATTTTTGGTT
TGTGCAAAGATGGCGGCGAAAGCGTCATGTCTTGCTTGGGAGGAGAAAATTCTGATACACACTCTCATCTATAGCTACGT
ATAAGTGTGTGTGTGAAAGGCTTCAGCGAAGACTGGAAA




Most similar to sp|Q28DR4|H4_XENTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q28DR4|H4_XENTR Histone H4 OS=Xenopus tropicalis GN=TGas006m08.1
           PE=3 SV=1
          Length = 103

 Score =  162 bits (410), Expect = 2e-39
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 89  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 268
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 81

Query: 269 VTAMDVVYALKRQGRTLYGFGG 334
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103